Fwd: bio computing and algebraic topology

Hi!

looked over some articles, asked some fellow-mathematicians and this is wha= I have got (keep in mind that I don't fully understand what bio-computing=means in this context).

The algebraic topology is used in computational models of protein folding. =t's not new, but the progress in the field is quite slow. I believe there =s no effective computational models here yet.

The other use of topology is study of graphs of organic compounds, drugs in=particular. I have heard that there are some progress here, it is possible=to do calculations here with some non-trivial results. In Russia there's a=company called Biocad, that does that.

Finally the third topology use is neuroscience. It is something of this kin= https://arxiv.org/pdf/1605.01905.pdf https://arxiv.org/pdf/1605.01905.pdf

If there's a particular project, I think I can give more specific answer>=

Regards,
Andrei Konyaev

data , neurons , etc are all embedeed in a space. mo=t anaylysis igoores the location. topology .in&nbs=; its basic form and tramformations in more tha 2 dim allows similar=data sets to be recognzied. yes it is not ye= used. it will be , my guess. .

Ok.

Then we talking about topological pattern recognition (this is the same as =omputational (co-) homology) in data.

I saw article about that back in 2014 by guy named Gunnar Carlsson from Stanford https://en.wikipedia.org/wiki/Gunnar_Carlsson http://www.ayasdi.com/wp-content/uploads/2015/02/ayasdi-top=logical-pattern-recognition-for-point-cloud-data.pdfIt

and here is an article

http://www.ayasdi.co=/wp-content/uploads/2015/02/ayasdi-topological-pattern-recognition-for-poi=t-cloud-data.pdf http://www.ayasdi.com/wp-content/uploads/2015/02/ayasdi-top=logical-pattern-recognition-for-point-cloud-data.pdf

Carlsson is quite famous, he solved so called Burnside conjecture in t=e 80s. It is possible to write him and ask if there anything in this field= He knows for sure.

Regards,
Andrei Konayev

regards
sb@